Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTGATGGATTACATGGTCAGCCAGGTC
(((((((..((.((((((....&.)))))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346413
GeneSymbolPCF11
Binding site3852,3883
Score0.846
Seed1
Au0.529
Energy-18.3
Binding len20
Me-10.654
Phylopstem0.7585250285714286
Phylopflank-0.16318642875000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure