Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGGGAAACCCCCCAGAGCTCTTTACCAAGGATGAAAGAGGAGCCAGG
..((((((((((((((((....&.))))))....................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080855
GeneSymbolPXN
Binding site3317,3367
Score0.846
Seed1
Au0.412
Energy-27.1
Binding len38
Me-4.957
Phylopstem1.265396994444444
Phylopflank3.235269347500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure