Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCCTAGGGGCTGGTGG
(((((((((((....((((...&))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001081491
GeneSymbolNXF1
Binding site1631,1650
Score0.846
Seed1
Au0.412
Energy-22.4
Binding len19
Me-10.166
Phylopstem2.0067060000000003
Phylopflank0.832781615
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure