Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACGGCAGCAGG
......((((.(((((((((.&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416245
GeneSymbolCASP6
Binding site2413,2428
Score1.0
Seed0
Au0.618
Energy-19.2
Binding len15
Me-18.391
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure