Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTCCAGAGGCCAGGG
.((((((.......((((....&)))).......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001081550
GeneSymbolTHOC2
Binding site3892,3910
Score0.846
Seed1
Au0.588
Energy-16.9
Binding len18
Me-16.723
Phylopstem5.32153945
Phylopflank5.8546290249999995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure