Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAAGAAGAAAAAGAGAAGAGGCCAGA
..((((((.((((((.((((((&)))))).))))..........)).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001081550
GeneSymbolTHOC2
Binding site3481,3512
Score0.923
Seed1
Au0.574
Energy-20.0
Binding len31
Me-6.246
Phylopstem5.813156383333333
Phylopflank5.92500855125
Longest consecutive pairings6
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure