Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCCAGA
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001081640
GeneSymbolPRKDC
Binding site8234,8245
Score0.923
Seed1
Au0.529
Energy-17.4
Binding len11
Me-8.071
Phylopstem1.3404680000000002
Phylopflank3.70613667625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure