Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAAAGGATTTAATAAAGTGG
((((...((((((((((((((.&))))))))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001081640
GeneSymbolPRKDC
Binding site2471,2498
Score0.923
Seed0
Au0.588
Energy-27.1
Binding len27
Me-11.501
Phylopstem2.4213531571428573
Phylopflank2.50224111625
Longest consecutive pairings14
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure