Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACTGGGAAAGGAGCA
.....((((((((((.(((((.&))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001081677
GeneSymbolSCN3A
Binding site314,331
Score0.923
Seed0
Au0.603
Energy-24.1
Binding len17
Me-13.899
Phylopstem0.09586299000000002
Phylopflank-0.10957513125000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure