Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCATGGTCAGTGG
((((((((......((((((((&)))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001081677
GeneSymbolSCN3A
Binding site5841,5859
Score0.923
Seed1
Au0.529
Energy-21.5
Binding len18
Me-14.554
Phylopstem5.452693375
Phylopflank5.2362921025
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure