Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGCTTTAGCTGA
...((((((.(((((((((..&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346413
GeneSymbolPCF11
Binding site2925,2942
Score1.0
Seed0
Au0.544
Energy-21.1
Binding len17
Me-7.757
Phylopstem-0.18212356666666663
Phylopflank-0.04950842624999999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure