Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGTGTGCCC
....(((((((.(((((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001083
GeneSymbolPDE5A
Binding site4009,4024
Score1.0
Seed0
Au0.632
Energy-19.7
Binding len15
Me-12.893
Phylopstem0.9034501857142857
Phylopflank0.63206658
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure