Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTAAGCACTGCAACACCAGCTGTT
..(((((((..((((((..((&.))..))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416269
GeneSymbolKIAA1109
Binding site6454,6483
Score0.838
Seed1
Au0.5
Energy-20.9
Binding len21
Me-9.024
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure