Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTACCTGGAGGAAGGAAGTGCGGAGCCAGC
..((((((((((((((((((.(&).))))))))))..........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001083601
GeneSymbolNAA60
Binding site171,202
Score0.846
Seed1
Au0.426
Energy-24.7
Binding len31
Me-4.957
Phylopstem0.03486851571428575
Phylopflank1.9432013884999997
Longest consecutive pairings10
Position of longest consecutive pairings19
Pairings in 3prime end7
Position5UTR
2D Structure