Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTTTTTTCTTTTTTTTTTTTTTGGAACCGCGGTTGTT
..((((((((((((.(((((.&.))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416331
GeneSymbolCBR4
Binding site53,95
Score0.923
Seed1
Au0.603
Energy-23.1
Binding len20
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure