Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGTATTTGTCATGCCAGT
..(((((((((((((((((...&))))))....)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001083603
GeneSymbolPTCH1
Binding site6822,6845
Score0.846
Seed1
Au0.706
Energy-19.3
Binding len23
Me-4.957
Phylopstem3.9729989545454547
Phylopflank4.792957232500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure