Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGA
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001083603
GeneSymbolPTCH1
Binding site4600,4610
Score0.846
Seed1
Au0.544
Energy-15.7
Binding len10
Me-13.079
Phylopstem6.163334444444445
Phylopflank5.089031766874999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure