Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCGGAAAGCGCCGCTGTGG
(((((((..((((((((.(((.&))).)))))))).))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001083605
GeneSymbolPTCH1
Binding site100,123
Score0.846
Seed1
Au0.441
Energy-23.1
Binding len23
Me-7.308
Phylopstem0.34345605
Phylopflank-0.018322168749999992
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure