Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGTATTTGTCATGCCAGT
..(((((((((((((((((...&))))))....)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001083606
GeneSymbolPTCH1
Binding site6672,6695
Score0.846
Seed1
Au0.706
Energy-19.3
Binding len23
Me-4.957
Phylopstem5.375391027272728
Phylopflank4.72891452625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure