Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGAAGACCCATCGCTGAGCTT
....((((((((((((((.((.&)))))))))))..........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001083612
GeneSymbolHYKK
Binding site484,511
Score0.846
Seed0
Au0.456
Energy-19.4
Binding len27
Me-9.547
Phylopstem3.2900374583333334
Phylopflank1.6579035299999998
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure