Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTGTGTGCA
.....(((((((((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001083953
GeneSymbolTHADA
Binding site533,547
Score0.846
Seed0
Au0.588
Energy-18.0
Binding len14
Me-13.666
Phylopstem0.7554620769230769
Phylopflank2.3532200675000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure