Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTCTGCCCTGCGACGTATGCCAGGA
.((((((((((..(((((....&.)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001085382
GeneSymbolPSAPL1
Binding site228,257
Score0.846
Seed1
Au0.353
Energy-23.4
Binding len19
Me-8.429
Phylopstem-0.33745481
Phylopflank-0.42083918
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure