Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTGCTTGGTTGCCTTTTTATGGGA
.(((((((..(((.(((((((.&))))))))))..)))).......))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001085451
GeneSymbolLNP1
Binding site1692,1719
Score0.846
Seed1
Au0.706
Energy-18.0
Binding len27
Me-6.949
Phylopstem0.3957716857142857
Phylopflank0.42388519625000004
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure