Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCAGCAATGCC
..((((((((((((((.....&)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346432
GeneSymbolLGR4
Binding site476,493
Score0.923
Seed1
Au0.221
Energy-22.7
Binding len17
Me-4.957
Phylopstem3.2509503124999997
Phylopflank4.0045745375
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure