Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGAGGGAAGCCGC
...(((((((((((((((.((.&))))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001085454
GeneSymbolGIT1
Binding site2024,2043
Score1.0
Seed0
Au0.309
Energy-26.3
Binding len19
Me-6.515
Phylopstem1.073953625
Phylopflank2.4266451912500004
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure