Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGCATGGTGTGACATTCGGCTACCAGGG
.((((((((((.((((((((((&)))))))))).)))))...........))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001090
GeneSymbolABCF1
Binding site1806,1839
Score0.846
Seed1
Au0.515
Energy-21.9
Binding len33
Me-7.14
Phylopstem4.7423720000000005
Phylopflank3.5233665800000002
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure