Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGACAGGGTCAGATGT
(((((((.(((.((((((....&)))))).)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001097590
GeneSymbolRPP38
Binding site50,69
Score0.846
Seed1
Au0.456
Energy-19.7
Binding len19
Me-9.598
Phylopstem-0.35928925
Phylopflank-0.5852850525000001
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end4
Position5UTR
2D Structure