Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTGAGACACGGCGGACACACACAAACACAGAACCACACAGCCAGTCCCAGGAGCCCAGTA
.((((((((((..((((.(...&.).))))....))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001097594
GeneSymbolXAGE1A
Binding site85,148
Score0.846
Seed1
Au0.471
Energy-21.3
Binding len23
Me-8.429
Phylopstem-0.6103866363636363
Phylopflank-0.4900035750000001
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end4
Position5UTR
2D Structure