Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAGGGAGTGAGCCATAACTGGTGG
(((((((((((((((((.(...&).)))))))).))))))......))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098213
GeneSymbolHRH1
Binding site156,183
Score0.846
Seed1
Au0.426
Energy-23.9
Binding len27
Me-3.938
Phylopstem0.13237779166666666
Phylopflank0.044066627499999955
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end4
Position5UTR
2D Structure