Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGGTGGAAAGTTGCTAGTGG
((((((((((..(((((((...&))))))).))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098272
GeneSymbolHMGCS1
Binding site5132,5156
Score0.846
Seed1
Au0.529
Energy-21.5
Binding len24
Me-10.109
Phylopstem6.191583600000001
Phylopflank4.30895547375
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure