Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGAAGGAGACAATCCCAGA
..(((((((((((((((((...&))))))))).))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098398
GeneSymbolCOPA
Binding site2442,2467
Score0.846
Seed1
Au0.5
Energy-23.7
Binding len25
Me-4.957
Phylopstem5.193971208333333
Phylopflank5.086593120000002
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure