Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGAGGGCGAGTGC
((((.((((...(((((((((.&))))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098479
GeneSymbolHLA-F
Binding site566,585
Score1.0
Seed0
Au0.441
Energy-23.7
Binding len19
Me-15.471
Phylopstem0.6500077777777779
Phylopflank-0.05125839750000011
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure