Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCTGGAGAGGAACAGAGATACACATGCCATGTGC
((((((((((((((((((.((.&)))))))))))))..............)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098479
GeneSymbolHLA-F
Binding site841,877
Score0.846
Seed1
Au0.382
Energy-23.0
Binding len36
Me-3.938
Phylopstem0.41109969696969695
Phylopflank0.5022181350000002
Longest consecutive pairings13
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure