Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGGAGCGGGGTCCTGGTGT
((((((((((((((((((....&)))))))).))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098497
GeneSymbolSGSM1
Binding site3479,3501
Score0.846
Seed1
Au0.338
Energy-22.9
Binding len22
Me-3.938
Phylopstem0.02477481428571427
Phylopflank-0.07878485375000009
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure