Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCATGCCTTGGGGGAATGGCCAGCGG
(.(((((((((((((((((((.&))))))).)....))))))...))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098502
GeneSymbolCHCHD4
Binding site349,379
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len30
Me-5.101
Phylopstem-0.35976412962962956
Phylopflank-0.05850518199999999
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure