Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGGGTAGGTGGGGGCCGGG
..(((((((((((((((.(...&).)))))).....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098514
GeneSymbolC16orf89
Binding site1292,1315
Score0.821
Seed1
Au0.382
Energy-22.8
Binding len23
Me-4.957
Phylopstem0.937136505
Phylopflank-0.06759165452702705
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure