Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAGCCGGGAAAGCCAGGGTGTGCCGGGC
.((((((((((..((.......&.))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001098531
GeneSymbolRAPGEF3
Binding site3128,3159
Score1.0
Seed1
Au0.338
Energy-20.5
Binding len16
Me-8.662
Phylopstem0.46087039999999996
Phylopflank0.28266599375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure