Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTTGGGAGGCTGGGGCAGG
..(((.(((((((((((((((.&))))))))))))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098540
GeneSymbolHPSE
Binding site2842,2864
Score0.923
Seed0
Au0.426
Energy-21.4
Binding len22
Me-6.858
Phylopstem-0.19047663529411765
Phylopflank0.68693072375
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure