Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTGGGGCAGGA
....(((((((((.(((((..&)))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001098540
GeneSymbolHPSE
Binding site2847,2865
Score0.846
Seed0
Au0.426
Energy-22.8
Binding len18
Me-10.403
Phylopstem0.038878008333333325
Phylopflank0.8176124737499999
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure