Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098614
GeneSymbolPUS7L
Binding site5779,5802
Score0.846
Seed1
Au0.426
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.40808559999999994
Phylopflank0.040933290000000004
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure