Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAAAATTTACCGAACCTTCAAGGATACTCTCAGAAGGAGCCAATGG
((.(((((((.(((((((.((.&.)))))))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098625
GeneSymbolJKAMP
Binding site935,984
Score0.923
Seed0
Au0.544
Energy-25.2
Binding len21
Me-8.32
Phylopstem4.743303857142856
Phylopflank4.606023687499999
Longest consecutive pairings16
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure