Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCAGGG
.((((((((((....(((....&.)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001098638
GeneSymbolRNF169
Binding site2877,2922
Score0.846
Seed1
Au0.441
Energy-21.5
Binding len18
Me-10.022
Phylopstem0.6163734
Phylopflank0.38791525000000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure