Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGTGATGCCTAGGA
.((((((((.((.(((((....&))))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001098638
GeneSymbolRNF169
Binding site4600,4618
Score0.846
Seed1
Au0.544
Energy-18.2
Binding len18
Me-6.325
Phylopstem0.22414618222222224
Phylopflank0.030370840750000006
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure