Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTAGCGCCTGTGCTTTCTCTCAGGCTCCGTGTGCCAGGG
.((((((((((...((.((...&.))..))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001098800
GeneSymbolMAGED4
Binding site694,734
Score0.846
Seed1
Au0.324
Energy-20.3
Binding len21
Me-9.286
Phylopstem1.0754058
Phylopflank1.6623601574999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure