Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGGTCCTGGCCAGTC
.(((((((....((((((((((&))))))))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098818
GeneSymbolPDE4C
Binding site389,411
Score0.846
Seed1
Au0.353
Energy-25.3
Binding len22
Me-12.264
Phylopstem-0.3073586
Phylopflank-0.585081492625
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure