Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTTCGTGCCAGC
..(((((((.....((((((..&))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001098819
GeneSymbolPDE4C
Binding site2537,2554
Score0.846
Seed1
Au0.588
Energy-16.1
Binding len17
Me-14.517
Phylopstem-0.25009098571428573
Phylopflank-0.04204302874999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure