Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGATCTGAGCCTACGCGGGGTGC
(((((((((...((((((((((&))))))))))...))))).......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001098819
GeneSymbolPDE4C
Binding site66,96
Score0.846
Seed1
Au0.324
Energy-27.4
Binding len30
Me-11.352
Phylopstem-0.5374588
Phylopflank-0.050042009999999984
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end8
Position5UTR
2D Structure