Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCGCAGCC
.....(((((.(((((((((.&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416722
GeneSymbolDNAJC21
Binding site392,407
Score1.0
Seed0
Au0.368
Energy-22.1
Binding len15
Me-16.49
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure