Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTGTGCCAGGC
.(((((((((((..((((((..&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001099294
GeneSymbolSHISAL1
Binding site1814,1832
Score0.904
Seed1
Au0.426
Energy-25.4
Binding len18
Me-5.939
Phylopstem-0.05690669090909097
Phylopflank-0.30945104199999995
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure