Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGAGATGCCAGGG
.((((((((.(..((((((...&))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001099294
GeneSymbolSHISAL1
Binding site908,926
Score1.0
Seed1
Au0.397
Energy-23.0
Binding len18
Me-9.672
Phylopstem-0.014339649999999995
Phylopflank0.34937103874999986
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure